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Papers 2009


Ohara H, Nikaido M, Date-Ito A, Mogi K, Okamura H, Okada N, Takeuchi Y, Mori Y, Hagino-Yamagishi K.
Conserved repertoire of orthologous vomeronasal type 1 receptor genes in ruminant species.
BMC Evol. Biol. 9(1):233. (2009) [Abstract]



Sugawara T, Imai H, Nikaido M, Imamoto Y, OkadaN
Vertebrate Rhodopsin Adaptation to Dim Light via Rapid Meta-II Intermediate Formation.
Mol. Biol.Evol. (in press) (2009) [Abstract]



Mzighani SI, Nikaido M, Takeda M, Seehausen O, Budeba YL, Ngatunga BP,Katunzi EFB, Aibara M, Mizoiri S, Sato T, Tachida H, Okada N
Genetic Variation and Demographic History of the Laparogramma Cichlid Species Group of Lake Victoria-An Analysis Based on SINEs and Mitochondrial DNA.
Gene (in press) (2009) [Abstract]



special issue in honor of Professor Masami Hasegawa


Okada N.
Special issue on phylogenomics and its future
Gene Jul 15;441(1-2):1-2 (2009) [Editorial]



Kojima KK, and Okada N.
mRNA retrotransposition coupled with 5' inversion as a possible sourceof new genes
Mol Biol Evol. 26 (6): 1405-20 (2009) [Abstract]



Nishihara H, Maruyama S, Okada N.
Retroposon analysis and recent geological data suggest near-simultaneous divergence of the three superorders of mammals.
Proc Natl Acad Sci USA. Mar 31;106(13):5235-40 (2009)@[Abstract] [OPEN ACCESS]



Kobayashi N, Watanabe M, Horiike T, Kohara Y, Okada N.
Extensive analysis of EST sequences reveals that all cichlid species in Lake Victoria share almost identical transcript sets.
Gene Jul 15;441(1-2):187-91 (2009) [Abstract]



Hirakawa M, Nishihara H, Kanehisa M, Okada N.
Characterization and evolutionary landscape of AmnSINE1 in Amniota genomes.
Gene Jul 15;441(1-2):100-10 (2009) [Abstract]



Murata Y, Yonezawa T, Kihara I, Kashiwamura T, Sugihara Y, Nikaido M, Okada N, Endo H, Hasegawa M.
Chronology of the extant African elephant species and case study of the species identification of the small African elephant with the molecular phylogenetic method.
Gene Jul 15;441(1-2):176-86 (2009) [Abstract]



Piskurek O, Nishihara H, Okada N.
The evolution of two partner LINE/SINE families and a full-length chromodomain-containing Ty3/Gypsy LTR element in the first reptilian genome of Anolis carolinensis.
Gene Jul 15;441(1-2):111-8 (2009) [Abstract]



Matveev V, Okada N.
Retroposons of salmonoid fishes (Actinopterygii: Salmonoidei) and their evolution.
Gene. 434(1-2):16-28 (2009) [Abstract]



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